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Synthesis and antibacterial activity against ralstonia solanacearum for novel hydrazone derivatives containing a pyridine moiety



Ralstonia solanacearum, one of the most important bacterial diseases on plants, is a devastating, soil-borne plant pathogen with a global distribution and an unusually wide host range. In order to discover new bioactive molecules and pesticides acting on tobacco bacterial wilt, we sought to combine the active structure of hydrazone and pyridine together to design and synthesize a series of novel hydrazone derivatives containing a pyridine moiety.


A series of hydrazone derivatives containing a pyridine moiety were synthesized. Their structures were characterized by 1 H-NMR, 13 C-NMR, IR, and elemental analysis. The preliminary biological activity tests showed that compound 3e and 3g exhibited more than 80% activity against Ralstonia solanacearum at 500 mg/L, especially compound 3g displayed relatively good activity to reach 57.0% at 200 mg/L.


A practical synthetic route to hydrazone derivatives containing a pyridine moiety by the reaction of intermediates 2 with different aldehydes in ethanol at room temperature using 2-chloronicotinic acid and 2-amino-5-chloro-3-methylbenzoic acid as start materials is presented. This study suggests that the hydrazone derivatives containing a substituted pyridine ring could inhibit the growth of Ralstonia solanacearum.


Ralstonia solanacearum (R. solanacearum), one of the most important bacterial diseases on plants, is a devastating, soil-borne plant pathogen with a global distribution and an unusually wide host range, which belongs to the β-proteobacteria and is considered as a "species complex". It causes a wilt disease with deadly effects in many important crops, such as in potato, tomato and eggplant firstly described by Smith in 1896 and subsequently in tobacco in 1908 [13]. Once the plants infected with bacterial wilt, the main symptoms of plants were rapid death, but stems and leaves remained green. Tobacco bacterial wilt, caused by R. solanacearum, is one of the main plant diseases in tobacco production and occurred in the most common and serious form. The high incidence of plant mortality and the lack of effective control methods make R. solanacearum become one of the world's most destructive plant pathogens [4, 5].

Pyridine is an important class of heterocyclic ring, which have been attracted more and more attention in the pesticides areas due to their broad-activities, such as fungicidal activity [68], insecticidal activity [9, 10] and herbicidal activity [11, 12]. In fungicidal activity regard, some pyridine derivatives can prevent Erysiphe graminis, Botrytis cinerea [13], Pyricularia oryzae [14] and Phytophthora infestans [15]. Currently, some pyridine compounds have been developed and commercialized, for example, fluopicolide [16], boscalid [17] and picoxystrobin [18] (Figure 1). In the recent literature, hydrazones demonstrated significant antimicrobial activity [19], antitubercular activity [20] and antitumoral activity [21] in medicinal areas. On the other hand, hydrazones also exhibit good fungicidal activity against Phytophthora infestans [22], Cladosporium cucumerinum and Colletotrichum orbiculare [23] in the pesticides areas, some of them containing hydrazone structure have been commercialized, such as benquinox and ferimzone [24] (Figure 1).

Figure 1
figure 1


Controlling of plant bacterial diseases has long been a challenging mission in the agricultural sector. The application of traditional pesticides has not proved much effective and at the same time high residue level or negative impact on the environment were caused. Copper formulation, a commercial bactericide can enhance resistance in host tobacco plant. Despite being useful in the treatment of plants affected by tobacco bacterial wilt, the use of copper formulation for field trial is largely limited due to its phytotoxicity, strong alkali and low mobility. Therefore, the search for new antibacterial agent still remains a daunting task in pesticide science [25]. In order to discover new molecules and pesticide acting on tobacco bacterial wilt, we sought to combine the active structure of hydrazone and pyridine together to design and synthesize a class of novel hydrazone derivatives containing a pyridine moiety. Thus, 2-chloronicotinic acid and 2-amino-5-chloro-3-methylbenzoic acid were used as start materials, 11 novel analogues of hydrazones containing pyridine were synthesized. All the compounds were unequivocally characterized by IR, NMR and elemental analysis. The biological activities on R. solanacearum were tested, the results showed that most of the synthesized compounds exhibited antibacterial activity against R. solanacearum to a certain extent, compounds 3e and 3g showed good antibacterial activity at 200 mg/L. especially compounds 3g displayed excellent antibacterial activity (57.0%) at 200 mg/L. To the best of our knowledge, this is the first report on the antibacterial activity of hydrazone derivatives containing a pyridine moiety.

Results and discussion


The synthetic route to the title compounds is demonstrated in Additional file 1. 6- chloro-2-(2-chloropyridin-3-yl)-8-methyl-4H-benzo[d] [1, 3]oxazin-4-one 1 were prepared by treatment of 2-chloronicotinic acid with 2-amino-5-chloro-3-methylbenzoic acid using readily available starting materials and a simple procedure as describing in the literature [26]. The further reaction of intermediates 1 with 80% hydrazine hydrate could proceed readily at room temperature to give intermediates 2 [27]. Subsequent treatment of intermediates 2 with different aldehydes in ethanol at room temperature afforded the desired compounds (3a to 3k). The synthetic route in Scheme 1 had several advantages, which included short steps, short reaction times and excellent yields (e.g. the yields for 3b, 3d, 3e and 3j were 93.3%, 96.6%, 96.6% and 93.6%, respectively), especially the mild conditions (room temperature). Additional file shows the structures, yields and elemental analysis data for title compounds in more detail [see Additional file 2].

All the synthesized compounds (3a-3k) were characterized on the basis of their spectroscopic data. The IR absorption bands near 3260-3180 cm-1, 3100-2910 cm-1, 1666-1610 cm-1, 1600-1575 cm-1 and 1367-1352 cm-1 confirmed the presence of two N-H, Ar-H, amide [28], - C = N- [29] and -CH3 functional groups, respectively. In the 1H-NMR spectra of the title compounds, the -CONHAr proton appeared as a broad singlet at 12.17-10.53; the -CONHN proton appeared as a broad singlet at 10.34-10.17; the -C = NH proton mainly appeared as a broad singlet at 8.73-8.20; the pyridine ring of 4 and 6 positions protons were occurred double-double peaks near 8.52-8.51 and 8.01-7.94; the methyl (Ar-CH3) proton signals were observed as a singlet near 2.34-2.30. Meanwhile, we observed the titles compounds possess E and Z configuration in the 1H-NMR spectra, but the E configuration was mainly forms by the spectra analysis, such as E configuration of -CONHAr proton appeared at 12.11, but Z proton was occurred at 12.01 in 3e, and the E/Z is approximately equal to 3.60.

Biological activity and structure-activity relationship

The antibacterial activity of compounds 3a-3k against R. solanacearum was assayed by the reported method [30]. Kocide, one of the proven commercial agents for controlling R. solanacearum, was used as the reference of bactericides. The results provided in Table 1 indicate that most of the prepared compounds have weak to good antibacterial activity against R. solanacearum at 500 mg/L. Compounds 3e and 3g displayed higher activities than compounds 3a-3d, 3f to 3h-3k at 500 mg/L. For example, inhibition of 3e (R2 = 3-trifluoromethylphenyl) and 3g (R2 = N, N-dimethylamino) on tobacco bacterial wilt was 80.9% and 100.0% at 500 mg/L, whereas 3a (R2 = Et), 3b (R2 = 2-chlorophenyl) and 3f(R = 4-tert-butylphenyl) was only 5.0%, 6.0% and 39.0% at the same condition. Primary structure- activity relationships revealed that when the CONHN = CHR2 was simultaneously substituted by N, N-dimethylamino (at the R2 group) and 3-trifluoromethylphenyl (at the R2 group), the activity on R. solanacearum increased. However, the introduction of CH2CH3, 2-chlorophenyl, 4-fluorophenyl, 2,6-dichlorophenyl, 4-tert-butylphenyl, 3, 4-dichlorophenyl, 2, 3-dimethoxyphenyl, 2, 4-dimethoxyphenyl and 2, 5-dimethoxy- phenyl groups into R2 groups decreased the activity of the compound. Furthermore, the mono- substituent at the different positions on phenyl of the R2 group also affected the bioactivity of the compound. For instance, the compound with trifluromethyl group at 3-position on phenyl ring (3e) displayed good activity, while the compounds with tert-butyl at 4-position on phenyl ring (3f) exhibited moderate activity and the compound with chlorine at 2-position on phenyl ring (3b) and the compound with fluorine at 4-position on phenyl ring (3c) showed no antibacterial activities on R. solanacearum. Compared with the same substituents on phenyl, the substituents at the 2, 3-positions, the corresponding molecules always had higher inhibition rates for tobacco bacterial wilt. For example, the inhibition rates of 3i (R2 = 2, 3-dimethoxyphenyl) and 3k (R2 = 2,4-dimethoxyphenyl) was 40.3%, 36.1% and the inhibition rates of 3j (R2 = 2,5-dimethoxyphenyl) on tobacco bacterial wilt was 25.2%.

Table 1 Antibacterial activity of compounds 3a to 3 k, Kocide against R. solanacearum



Unless otherwise stated, all the reagents and reactants were purchased from commercial suppliers; melting points were uncorrected and determined on a XT-4 binocular microscope (Beijing Tech Instrument Co., China). The 1H-NMR and 13 C-NMR spectra were recorded on a JEOL ECX 500 NMR spectrometer (JEOL Ltd., Japan) at room temperature operating at 500 MHz for 1H-NMR and 125 MHz for 13 C-NMR by using CDCl3 or DMSO as solvents and TMS as an internal standard; infrared spectra were recorded in KBr on a IR Pristige-21 spectrometer (Shimadzu corporation, Japan); elemental analysis was performed on an Elemental Vario-III CHN analyzer (Elementar, German). The course of the reactions was monitored by TLC; analytical TLC was performed on silica gel GF 254.

Intermediate 1 and 2 were prepared according to the reported methods [26, 27] and used without further purifications [Additional file 3].

Antibacterial biological assay

Antibacterial activities of some title compounds against R. solanacearum were evaluated by the turbidimeter test [30], whereas Kocide® 3000 was the positive control. The compounds were dissolved in 30 μL DMSO and diluted with water containing TWEEN-20 (0.1 mg/L) to generate a final concentration of 500 mg/L and 200 mg/L, which were added to the toxic nutrient broth (NB) liquid medium in 5 mL tubes, respectively. To the above tubes, 40 μL NB liquid medium containing R. solanacearum pathogen was individually added, then shaken at 30°C and 180 r.p.m. for 48 h, the relative inhibition rate of the circle mycelium compared to blank assay was calculated via the following equation.

Relative inhibition rate % = A 0 - A 1 A 0 × 100 %

A0: Corrected OD values of the control medium of bacilli;

A1: Corrected OD values of the medium of toxic.


In conclusion, a series of the novel hydrazone derivatives containing a substituted pyridine ring were designed and synthesized. The reaction of intermediates 2 with different aldehydes in ethanol at room temperature used 2-chloronicotinic acid and 2-amino-5-chloro-3-methylbenzoic acid as start materials provides a ready access to a series of the novel hydrazone derivatives containing pyridine moiety. The antibacterial tests indicated that some of the synthesized compounds possessed of moderately high activity against R. solanacearum. The title compounds 3e and 3g exhibited favourable activity against tobacco bacterial wilts in vitro compared to the commercial bactericides Kocide 3000. The antibacterial tests showed that when the R2 group of CONHN = CHR2 was 3-trifluoromethylphenyl or N, N-dimethylamino, the corresponding compounds presented good antibacterial activities. The structure of the target products needs to be optimized to enhance their antibacterial activity. Future structural modification and biological evaluation should be carried out to explore the full potential of this novel class of antibacterial molecules.


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This work was supported the National Key Program for Basic Research (No. 2010CB 126105), Key Technologies R&D Program (No.2011BAE06B05-6) and National Natural Science Foundation of China (No.21162004), the Special Foundation of Governor for Outstanding talents in Guizhou (No.2011-38).

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Correspondence to Baoan Song or Song Yang.

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The authors declare that they have no competing interests.

Authors' contributions

The current study is an outcome of constructive discussion with BAS, SY and DYH who offered necessary guidance to JW and SHK to carry out their synthesis and characterization experiments. Both of JW and SHK were also involved in the drafting of the manuscript. MH performed the Antibacterial tests; LHJ carried out the 1H NMR, 13 C NMR spectral analyses and elemental analysis. BAS and SY were involved in revising the manuscript. All authors read and approved the final manuscript.

Jian Wu, Shenghong Kang contributed equally to this work.

Electronic supplementary material


Additional file 1: Synthetic route to target compounds 3a-k. Synthetic sequence to the novel hydrazone analogues 3 containing pyridine ring from 1 and 2. (DOC 174 KB)


Additional file 2: Yield and elemental analyses data for title compounds 3a-k. Which contains the a table about structure, yield and elemental analyses data for title compounds 3a-k. (DOC 78 KB)


Additional file 3: Experimental details and data of title compounds 3a-k. Which includes the experimental procedure, spectroscopic data of intermediate 1, intermediate 2, title compounds 3a-k, copies of 1H NMR and 13C NMR. (DOC 2 MB)

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Wu, J., Kang, S., Song, B. et al. Synthesis and antibacterial activity against ralstonia solanacearum for novel hydrazone derivatives containing a pyridine moiety. Chemistry Central Journal 6, 28 (2012).

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