Fig. 6From: Novel glitazones as PPARγ agonists: molecular design, synthesis, glucose uptake activity and 3D QSAR studiesAnalysis of RMSD, Rg, hydrogen bond, SASA and RMSF of PPARγ with reference ligand, CPD 07 and CPD 21 complexes at 5000 ps. a Time evolution of backbone RMSD of the PPARγ protein alone and with reference ligand, CPD 07 and CPD 21 complex structures. b Radius of gyration (Rg) of the protein backbone in its free and complex form over the entire simulation time. The ordinate is Rg (nm) and abscissa is time (ps) interval. c Hydrogen bonds occurring over the time of simulation between protein and different ligands. d SASA is indicated, where ordinate is SASA (nm) and abscissa is time (ps). e. I and II Residue wise average RMSF plot of protein and different ligandsBack to article page