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Table 1 The sequences of the primers and probes for the qPCR and dPCR analysis of 3 plasmids

From: Quantification of plasmid DNA reference materials for Shiga toxin-producing Escherichia coli based on UV, HR-ICP-MS and digital PCR

primer/probe

Sequence 5′–3′

Amplicon size (bp)

fliC-FP

CCGCGAGCGAAGGTAGTG

75

fliC-RP

CAGGAGTTGCTTTTGCGATAGTATAT

fliC-probe*

FAM-CGGTGCTTCTCTGACATTCAATGGCA- TAMRA

stx1-FP

TGCAGATAAATCGCCATTCG

123

stx1-RP

AAGCTTCAGCTGTCACAGTAACAAA

stx1-probe

FAM-ACCTCACTGACGCAGTCTGTGGCAAGA- TAMRA

stx2-FP

CACTGTCTGAAACTGCTCCTGTTT

78

stx2-RP

TGCTGATTCTCCCCCAGTTC

stx2-probe

FAM-CGGTGCTTCTCTGACATTCAATGGCA- TAMRA

  1. * The Taqman probe was labeled with a FAM fluorophore and a TAMRA quencher