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Table 2 Compounds identified from tissue extractions of Panax quinquefolium samples

From: Tissue-specific metabolite profiling and quantitative analysis of ginsenosides in Panax quinquefolium using laser microdissection and liquid chromatography–quadrupole/time of flight-mass spectrometry

Peak no.

Identity

tR (min)

Molecular formular

[M−H]+

[M−H+HCOOH]+ (mass accuracy, ppm)

Fragments of [M−H]+ (m/z)

Mean measured mass (Da)

Theoretical exact mass (Da)

Mass accuracy (ppm)

1

20-Glc-G-Rf

6.58

C48H82O19

961.5522

961.5378

14.98

1007.5578

799.5047 [M−H−Glc]

2

Notoginsenoside R1

7.04

C47H80O18

931.5186

931.5278

−9.88

977.5465

799.5026 [M−H−Xyl]

637.4285[M−H−Glc−Xyl];

3

G-Rg a1

8.04

C42H72O14

799.4975

799.4849

15.76

845.5026

637.4360 [M−H−Glc]

475.3785 [M−H−2Glc]

4

G-Rea

8.12

C48H82O18

945.5548

945.5428

12.69

991.5630

799.4935 [M−H−Rha]

783.5029 [M−H−Glc]

637.4407 [M−H−Rha−Glc]

5

Malonyl-G-Rg1

9.25

C45H74O17

885.5082

885.4853

25.86

841.3240 [M−H−CO2]

6

Malonyl-G-Re isomer

9.56

C51H84O21

1031.5547

1031.5432

11.15

987.5678[M−H−CO2]

7

Malonyl-G-Re

10.32

C51H84O21

1031.5549

1031.5432

11.34

987.5644[M−H−CO2]

8

Floralquinquenoside B

11.73

C42H72O15

815.4884

815.4793

11.16

637.4381[M−H−Rha−CH3OH]

9

Floralquinquenoside D

12.65

C42H72O15

815.4882

815.4793

10.91

861.5002

653.4360 [M−H−Glc]

10

Unknown

13.26

961.5559

1007.5580

11

Notoginsenoside Rw2

14.43

C41H70O14

785.4780

785.4687

11.84

831.4871

653.4361 [M−H−Xyl]

491.3674 [M−H−Xyl−Glc]

12

Pseudoginsenoside F11

14.99

C42H72O14

799.4831

799.4844

−1.63

845.5015

653.4385 [M−H−Rha]

13

Notoginsenoside R2

15.89

C41H70O13

769.4573

769.4738

−21.44

815.4730

637.4392 [M−H−Xyl]

475.3839 [M−H− Xyl−Glc]

14

20 (S)-G-Rg a2

17.23

C42H72O13

783.5029

783.4900

16.46

829.5054

637.4394 [M−H−Rha]

475.3734 [M−H−Rha−Glc]

15

G-Rb a1

18.38

C54H92O23

1107.6097

1107.5957

12.64

945.5552[M−H−Glc]

783.5012 [M−H−2Glc]

16

Malonyl-G-Rb1

18.99

C57H94O26

1193.6113

1193.5961

12.73

1149.6201[M−H−CO2]

17

G-Ro

19.33

C48H76O19

955.5077

955.4908

17.69

793.2586[M−H−Glc]

18

G-Rc

19.34

C53H90O22

1077.5730

1077.5871

−13.08

945.5660 [M−H−Araf]

783.4980 [M−H−Araf −Glc]

19

Malonyl-G-Rb1 isomer I

19.63

C57H94O26

1193.6142

1193.5961

15.16

1149.6185[M−H−CO2]

20

Unknown

19.80

1087.5461

 

21

Malonyl-G-Ra2

19.97

C56H92O25

1163.5993

1163.5855

11.86

1119.6041[M−H−CO2]

22

Malonyl-G-Rb1 isomer II

20.38

C57H94O26

1193.6101

1193.5961

11.73

1149.6192[M−H−CO2]

23

G-Rb a2

20.47

C53H90O22

1077.5683

1077.5851

−15.59

1123.6337

945.5674 [M−H−Arap]

24

G-Rb3

20.79

C53H90O22

1077.5977

1077.5851

11.69

1123.6637

945.5587 [M−H−Xyl]

915.5474 [M−H−Glc]

25

Unknown

20.91

1119.6015

925.4844

26

Ma- Rb2/Rb3 isomer

21.34

C56H92O25

1163.5992

1163.5849

12.29

1119.6007[M−H−CO2]

27

O-acetyl-G-Rb1

21.68

C56H94O24

1149.6198

1149.6062

11.83

1195.6270

1107.6067 [M−H−Acetyl]

945.5466 [M−H−Acetyl−Glc]

28

Zingibroside R1

21.92

C42H65O14

793.4479

793.4374

13.23

631.3332[M−H−Glc]

29

G-Rda

22.59

C48H82O18

945.5548

945.5428

12.69

991.5613

783.4985 [M−H−Glc]

621.4432 [M−H−2Glc]

30

Malonyl-G-Rd

23.18

C51H84O21

1031.5614

1031.5432

17.64

987.5682[M−H−CO2]

31

G-Rd isomer

24.49

945.5543

945.5428

12.16

991.5069

783.4985 [M−H−Glc]

621.4432 [M−H−2Glc]

32

20 (S)-G-Rg3

27.55

C42H72O13

783.4978

783.4900

9.96

829.5057

621.4375 [M−H−Glc]

459.4088 [M−H−2Glc]

33

Chikusetsusaponin IVa

27.69

C42H66O14

793.4367

793.4380

−1.64

34

20 (R)-G-Rg3

28.14

C42H72O13

783.4982

783.4900

10.47

829.5065

621.4375 [M−H−Glc]

459.3964 [M−H−2Glc]

  1. G ginsenoside, Glc β-d-glucopyranosyl, Rha α-l-rhamnopyranosyl, Xyl β-d-xylopyranosyl, Araf α-l-arabinofuranosyl, Arap α-l-arabinopyranosyl
  2. aIdentified with chemical marker