From: Finding one's way in proteomics: a protein species nomenclature
Level | Comment | Descriptor |
---|---|---|
A: Gene | Entry name (gene name + species) | G_ACE_humana |
B: Nucleotide polymorphism | SNP Accession number | SNP_rs10853044 |
C: Initial amino acid sequence of the protein synthesized at the ribosome | Accession number (AC) + sequence version (_1) | AC_ P12821-1_1 |
Splicing variant (S) with deletion _ localisation of the deletion | SD_70-79 | |
Splicing variant with insertion _ localisation of the insertion | SI_43_ LLELFVMFL | |
Splicing variant with an exchange of amino acids | SE_38_RQELWQG_SKEHWNQb | |
D: Proteolysis | Truncated amino acids: 1-17: the first 17 amino acids were removed | T_1-17 |
E: Posttranslational Modification (P) | Position of the modified amino acid | P_33_21c |
F: Cofactor (C) | Identity of non-covalently bound cofactors | C_Zn(2x)d |
G: Further descriptors | Can be added, if necessary | X, Y |