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Table 2 Comparison of success rates for 48 complexed und 48 unbound protein structures.

From: PocketPicker: analysis of ligand binding-sites with shape descriptors

 

Top 1

Top 3

 

Unbound

Bound

Unbound

Bound

PocketPicker

69

72

85

85

LIGSITEcs

60

69

77

87

LIGSITE

58

69

75

87

CAST

58

67

75

83

PASS

60

63

71

81

SURFNET

52

54

75

78

LIGSITEcsc1

71

79

-

-

  1. 1Results of LIGSITEcsc are given for the sake of completeness. Note that the comparability to the other methods findings is limited, due to the fact that LIGSITEcsc is not a purely geometric approach.