Skip to main content

Advertisement

Table 2 Comparison of success rates for 48 complexed und 48 unbound protein structures.

From: PocketPicker: analysis of ligand binding-sites with shape descriptors

  Top 1 Top 3
  Unbound Bound Unbound Bound
PocketPicker 69 72 85 85
LIGSITEcs 60 69 77 87
LIGSITE 58 69 75 87
CAST 58 67 75 83
PASS 60 63 71 81
SURFNET 52 54 75 78
LIGSITEcsc1 71 79 - -
  1. 1Results of LIGSITEcsc are given for the sake of completeness. Note that the comparability to the other methods findings is limited, due to the fact that LIGSITEcsc is not a purely geometric approach.